Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1140914	1140993	80	20 [0]	[1] 16	flgK	flagellar hook‑filament junction protein 1

CCCGCGGTTCTGCAAAACACGAAAAACAAAGGTGACGTTGCGATCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGATAAT  >  W3110S.gb/1140951‑1141058                                            |                                                                 cccGCGGTTCTGCAAAACACGAAAAACAAAGGTGACGTTGCGATCGGTGCCa                                                          <  1:646195/52‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:1089022/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:1438289/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  >  1:1609319/1‑65 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:1662774/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:1944157/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:2245367/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:2334747/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:284494/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:372731/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:406561/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:516741/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:621268/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:669706/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:860666/65‑1 (MQ=255)                                            tCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGataat  <  1:902632/65‑1 (MQ=255)                                            |                                                                 CCCGCGGTTCTGCAAAACACGAAAAACAAAGGTGACGTTGCGATCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGATAAT  >  W3110S.gb/1140951‑1141058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑