Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1203826	1203831	6	15 [0]	[0] 54	ymfJ/ymfK	hypothetical protein/repressor protein phage e14

TTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGA  >  W3110S.gb/1203832‑1203895 |                                                                ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTTAGAAAATCACAGTACCAATTATaga  >  1:2311961/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTAc            >  1:2368049/1‑54 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATtat     >  1:1984108/1‑61 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:300550/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:2259375/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:2303312/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:2319625/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:2342733/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:234792/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:2348282/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:2368925/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:2390136/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:260827/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:278118/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:2180738/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:478849/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:550035/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:583473/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:608278/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:618612/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:666179/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:676616/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:688730/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:770016/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:90894/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:938370/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:953246/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:150518/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1088578/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1111992/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1227329/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1238992/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1256119/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1336141/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:133851/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1343924/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1419738/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1420529/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1467231/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1036586/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1551746/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1591432/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1658135/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:172725/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1752498/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1771412/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1772806/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1836936/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1850983/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1933492/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1936701/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga  >  1:1945955/1‑64 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATag   >  1:1218807/1‑63 (MQ=255) ttGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACAAATTATaga  >  1:368420/1‑64 (MQ=255) |                                                                TTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGA  >  W3110S.gb/1203832‑1203895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑