Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1268816	1268855	40	12 [0]	[0] 35	ychQ	predicted transcriptional regulator

TTAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGAA  >  W3110S.gb/1268856‑1268920 |                                                                 ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATc                  >  1:2514656/1‑49 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGAtt       >  1:2314374/1‑60 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1086364/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:972207/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:885587/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:881189/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:774978/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:71931/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:662514/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:608528/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:513604/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:422795/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:38202/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:361108/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:263475/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:2379179/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:2145690/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1149369/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1155380/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1161755/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1205147/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1208799/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1295316/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1365634/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1376594/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:1643648/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:2049300/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:2052670/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGaa  >  1:217096/1‑65 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGa   >  1:1971991/1‑64 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGa   >  1:1073789/1‑64 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGa   >  1:974467/1‑64 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGa   >  1:994272/1‑64 (MQ=255) ttAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTAGaa  >  1:1950805/1‑65 (MQ=255) ttAAACTCGCCACCACAAAACTACCGTTACTGGGCTAAGTCATGAGATCGTTAGCTGATTTCGa   >  1:2466206/1‑64 (MQ=255) |                                                                 TTAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAAGTCATGAGATCGTTAGCTGATTTCGAA  >  W3110S.gb/1268856‑1268920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑