Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1290493	1290494	2	28 [0]	[0] 7	ychJ	conserved hypothetical protein

TGCGCAAATCCGGCCATCAATTCGGCACGTAACGCCGCTGCTCCACAAGAGGGATGCCAGG  >  W3110S.gb/1290495‑1290555 |                                                             tGCGCAAATCCGGCCATCAATTCGGCACGTAACGCCGCTGCTCCACAAGAGGTATGCCAgg  <  1:725957/61‑1 (MQ=255) tGCGCAAATCCGGCCATCAATTCGGCACGTAACGCCGCTGCTCCACAAGAGGGATGCCAgg  <  1:1289332/61‑1 (MQ=255) tGCGCAAATCCGGCCATCAATTCGGCACGTAACGCCGCTGCTCCACAAGAGGGATGCCAgg  <  1:1916042/61‑1 (MQ=255) tGCGCAAATCCGGCCATCAATTCGGCACGTAACGCCGCTGCTCCACAAGAGGGATGCCAgg  <  1:1920586/61‑1 (MQ=255) tGCGCAAATCCGGCCATCAATTCGGCACGTAACGCCGCTGCTCCACAAGAGGGATGCCAgg  <  1:2053640/61‑1 (MQ=255) tGCGCAAATCCGGCCATCAATTCGGCACGTAACGCCGCTGCTCCACAAGAGGGATGCCAgg  <  1:2321295/61‑1 (MQ=255) tGCGCAAATCCGGCCATCAATTCGGCACGTAACGCCGCTGCTCCACAAGAGGGATGCCAgg  <  1:299075/61‑1 (MQ=255) |                                                             TGCGCAAATCCGGCCATCAATTCGGCACGTAACGCCGCTGCTCCACAAGAGGGATGCCAGG  >  W3110S.gb/1290495‑1290555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑