Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1462996	1463074	79	28 [0]	[0] 31	paaJ	predicted beta‑ketoadipyl CoA thiolase

CAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCA  >  W3110S.gb/1463075‑1463137 |                                                               cAATTTGGAACTGGCAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1804431/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACTGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1481277/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:2499128/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:974784/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:916355/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:908589/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:889142/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:778569/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:776974/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:750658/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:699893/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:667393/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:655586/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:438458/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:361979/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:311978/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:2532192/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1065758/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:244439/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:2442406/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:2372423/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:2016812/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1975781/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1940303/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1820544/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1653234/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1633946/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1522689/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1340773/63‑1 (MQ=255) cAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:1068016/63‑1 (MQ=255) cAATTTGGAACTGACAGAATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCa  <  1:660669/63‑1 (MQ=255) |                                                               CAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCA  >  W3110S.gb/1463075‑1463137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑