Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1637588–1637770	1637880	111–293	19 [0]	[2] 40	nohA	predicted packaging protein

GGAGATCTGTCTCGCTGGCCTGCCGCAGTTCTTCAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATAA  >  W3110S.gb/1637850‑1637945                                |                                                                 ggAGATCTGTCTCGCTGGCCTGCCGCAGTTCTTCAACTTCCCGGCGCAGCTTTTCGTTCTCAAtt                                 <  1:1869253/65‑1 (MQ=255)                         gCAGTTCTTCAACTTCCCGGCGCAGCTTTTCGTTCTCAAtt                                 <  1:317458/41‑1 (MQ=38)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:2191473/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:997158/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:775701/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:712821/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:671447/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:620075/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:559164/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:378641/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:2477817/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:23512/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:231536/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:1085076/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:2071425/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:19873/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:1171510/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:1699842/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:1616898/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:120065/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:1563298/62‑1 (MQ=255)                              atttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTta     <  1:1463156/62‑1 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGc                >  1:713561/1‑51 (MQ=35)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCtt      >  1:2538298/1‑61 (MQ=40)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:1449449/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:1100291/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:902531/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:1214617/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:1273624/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:1291604/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:533926/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:522771/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:380215/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:1969013/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:274561/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:235148/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:1577543/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:2172339/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATaa  >  1:2168822/1‑65 (MQ=255)                                ttcAACTTCCCGGCGCAGCTTTACGTTCTCAAATTCAGCATcc                        >  1:1907573/1‑43 (MQ=14)                                |                                                                 GGAGATCTGTCTCGCTGGCCTGCCGCAGTTCTTCAACTTCCCGGCGCAGCTTTTCGTTCTCAATTTCAGCATCCCTTTCGGCATACCATCTTATAA  >  W3110S.gb/1637850‑1637945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑