Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1904117	1904122	6	22 [0]	[0] 37	manX	fused mannose‑specific PTS enzyme IIAB components

CAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCT  >  W3110S.gb/1904123‑1904187 |                                                                 cAGGCCGTGAAGGCGTGAAAGCGCTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2326127/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGaa                       >  1:2257149/1‑44 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGc         >  1:713895/1‑58 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:357386/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2282382/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2341309/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2375273/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2433610/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2452570/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2505004/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:347048/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:902917/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:389694/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:56503/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:610762/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:651900/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:773812/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:887106/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1049013/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1763425/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1121088/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1271115/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1304456/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1388172/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1428245/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1489793/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1525936/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1554844/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2246610/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1848648/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1853531/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1883682/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:1915282/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2100883/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2116852/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCt  >  1:2130607/1‑65 (MQ=255) cAGGCCGTGAAGGCGTGAAAGCAATGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCg    >  1:2334548/1‑63 (MQ=255) |                                                                 CAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCT  >  W3110S.gb/1904123‑1904187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑