Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1905570	1905586	17	26 [2]	[0] 8	manY	mannose‑specific enzyme IIC component of PTS

ACTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAACTCACT  >  W3110S.gb/1905587‑1905650 |                                                                aCTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAactcact  >  1:1271236/1‑64 (MQ=255) aCTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAactcact  >  1:13413/1‑64 (MQ=255) aCTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAactcact  >  1:146600/1‑64 (MQ=255) aCTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAactcact  >  1:1474544/1‑64 (MQ=255) aCTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAactcact  >  1:1525153/1‑64 (MQ=255) aCTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAactcact  >  1:2275686/1‑64 (MQ=255) aCTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAactcact  >  1:2534854/1‑64 (MQ=255) aCTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAactcact  >  1:717635/1‑64 (MQ=255) |                                                                ACTGGACTAACAGGTGAGCGAAATGGTTGATACAACTCAAACTACCACCGAGAAAAAACTCACT  >  W3110S.gb/1905587‑1905650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑