Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 1965325 1965325 1 17 [0] [0] 18 flhA predicted flagellar export pore protein

GTGTACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCA  >  W3110S.gb/1965326‑1965372
|                                              
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1750230/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:835115/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:800727/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:514353/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:453542/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:398701/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:2205233/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1898669/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1756303/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1042390/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1661759/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1660836/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1642392/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1344189/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1123765/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1123659/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1105273/47‑1 (MQ=255)
gtgtACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCa  <  1:1070411/47‑1 (MQ=255)
|                                              
GTGTACCCCTGAATCTGCGCCTGTTCTTTTAGCGCACTTTCAATCCA  >  W3110S.gb/1965326‑1965372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: