Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1977748	1977782	35	4 [1]	[1] 14	motB	protein that enables flagellar motor rotation

TCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCAGCCACATC  >  W3110S.gb/1977780‑1977841    |                                                           tCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCAGCCACATc  >  1:1951018/1‑62 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:1173197/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:1265176/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:1418853/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:1474257/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:1496777/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:1536309/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:1806107/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:1953270/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:1960321/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:2067439/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:2349385/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:308974/51‑1 (MQ=255)    ggAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCa          <  1:415614/51‑1 (MQ=255)    |                                                           TCCGGAAGTACTCCGCAATCTGAATCAGCTCTTTTGGGCTGGAGATGGAGATCAGCCACATC  >  W3110S.gb/1977780‑1977841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑