Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2016209	2016221	13	16 [0]	[0] 5	fliF	flagellar basal‑body MS‑ring and collar protein

CTCATGCGGCGCTTCGTTCACGCCAGCTTAATGAGAGCGAGCAAAGCGGTTCCGGTTATCCGGGC  >  W3110S.gb/2016222‑2016286 |                                                                 ctcATGCGGCGCTTCGTTCAGGCCAGCTTAATGAGAGCGAGCAAAGCGGTTCCGGTTATCCGggc  >  1:247211/1‑65 (MQ=255) ctcATGCGGCGCTTCGTTCACGCCAGCTTAATGAGAGCGAGCAAAGCGGTTCCGGTTATCCGggc  >  1:1668066/1‑65 (MQ=255) ctcATGCGGCGCTTCGTTCACGCCAGCTTAATGAGAGCGAGCAAAGCGGTTCCGGTTATCCGggc  >  1:434217/1‑65 (MQ=255) ctcATGCGGCGCTTCGTTCACGCCAGCTTAATGAGAGCGAGCAAAGCGGTTCCGGTTATCCGggc  >  1:658076/1‑65 (MQ=255) ctcATGCGGCGCTTCGTTCACGCCAGCTTAATGAGAGCGAGCAAAGCGGTTCCGGTTATCCGggc  >  1:796134/1‑65 (MQ=255) |                                                                 CTCATGCGGCGCTTCGTTCACGCCAGCTTAATGAGAGCGAGCAAAGCGGTTCCGGTTATCCGGGC  >  W3110S.gb/2016222‑2016286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑