Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2017516	2017526	11	8 [0]	[0] 14	fliG	flagellar motor switching and energizing component

GCGCTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCAA  >  W3110S.gb/2017527‑2017591 |                                                                 gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:104952/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:1100966/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:1139739/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:1346500/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:1575017/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:1889485/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:2013372/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:2069452/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:2286487/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:293524/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:466864/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:575116/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCaa  <  1:934488/65‑1 (MQ=255) gcgcTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGGCAGAATCTCAAGCGCAGCaa  <  1:6474/65‑1 (MQ=255) |                                                                 GCGCTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCAA  >  W3110S.gb/2017527‑2017591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑