Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2020875	2021038	164	10 [0]	[0] 4	fliK	flagellar hook‑length control protein

ACAGCACAGCCTGATGACGCCCCCGGCACACCAGCTCAGC  >  W3110S.gb/2021039‑2021078 |                                        acagcacagcCTGATGACGCCCCCGGCACACCAGCTCAGc  >  1:1042890/1‑40 (MQ=255) acagcacagcCTGATGACGCCCCCGGCACACCAGCTCAGc  >  1:1472924/1‑40 (MQ=255) acagcacagcCTGATGACGCCCCCGGCACACCAGCTCAGc  >  1:2212043/1‑40 (MQ=255) acagcacagcCTGATGACGCCCCCGGCACACCAGCTCAGc  >  1:586363/1‑40 (MQ=255) |                                        ACAGCACAGCCTGATGACGCCCCCGGCACACCAGCTCAGC  >  W3110S.gb/2021039‑2021078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑