Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2056902	2056973	72	7 [2]	[0] 19	shiA	shikimate transporter

ATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTG  >  W3110S.gb/2056974‑2057036 |                                                               aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:2334999/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:998642/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:882216/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:774843/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:749199/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:498506/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:333112/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:29488/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:2454553/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:2353946/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:1081501/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:2331955/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:2260157/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:2238631/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:2235537/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:2212994/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:1646099/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:1251473/63‑1 (MQ=255) aTTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTgctg  <  1:108329/63‑1 (MQ=255) |                                                               ATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTG  >  W3110S.gb/2056974‑2057036

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑