Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2073391	2073416	26	18 [2]	[0] 10	yeeP/flu	CP4‑44 prophage region; ECK1991:JW5327:b1999; predicted GTP‑binding protein/antigen 43 (Ag43) phase‑variable biofilm formation autotransporter

CTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTA  >  W3110S.gb/2073417‑2073481 |                                                                 ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATc                    >  1:1134837/1‑47 (MQ=255) ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATc                    >  1:1873503/1‑47 (MQ=255) ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATc                    >  1:2098971/1‑47 (MQ=255) ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATc                    >  1:2502145/1‑47 (MQ=255) ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATc                    >  1:635580/1‑47 (MQ=255) ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCt                   >  1:1068799/1‑48 (MQ=255) ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTa                  >  1:91304/1‑49 (MQ=255) ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTAttt               >  1:738184/1‑52 (MQ=255) ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTAt                 >  1:1346944/1‑50 (MQ=255) ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTta  >  1:133571/1‑65 (MQ=255) |                                                                 CTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTA  >  W3110S.gb/2073417‑2073481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑