Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2075951	2075954	4	5 [0]	[0] 26	flu	antigen 43 (Ag43) phase‑variable biofilm formation autotransporter

TATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAC  >  W3110S.gb/2075955‑2076018 |                                                                tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAgg       >  1:816451/1‑59 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGag  >  1:155807/1‑63 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:215599/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:935716/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:762851/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:637445/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:597899/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:585014/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:500861/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:380769/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:303703/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:283943/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:2425093/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:2300891/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:10007/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:2044175/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:1915459/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:1893658/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:1610955/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:1489716/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:1390235/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:1284170/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:120404/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:1066394/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:1005671/1‑64 (MQ=255) tATTGCCCGTGGGGCCACGCCGAAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAc  >  1:2009757/1‑64 (MQ=255) |                                                                TATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGAC  >  W3110S.gb/2075955‑2076018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑