Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2099765	2099772	8	23 [0]	[0] 4	cld	regulator of length of O‑antigen component of lipopolysaccharide chains

TTCGCCAGTCTGTTGAATCTGCGGTTTTGTCACCTGCGCCTGATT  >  W3110S.gb/2099773‑2099817 |                                             ttCGCCAGTCTGTTGAATCTGCGGTTTTGTCACCTGCGCCTGAtt  <  1:1146789/45‑1 (MQ=255) ttCGCCAGTCTGTTGAATCTGCGGTTTTGTCACCTGCGCCTGAtt  <  1:2023527/45‑1 (MQ=255) ttCGCCAGTCTGTTGAATCTGCGGTTTTGTCACCTGCGCCTGAtt  <  1:232597/45‑1 (MQ=255) ttCGCCAGTCTGTTGAATCTGCGGTTTTGTCACCTGCGCCTGAtt  <  1:255857/45‑1 (MQ=255) |                                             TTCGCCAGTCTGTTGAATCTGCGGTTTTGTCACCTGCGCCTGATT  >  W3110S.gb/2099773‑2099817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑