Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 710,341 | C→T | P44S (CCA→TCA) | ybfN → | predicted lipoprotein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 710,341 | 0 | C | T | 100.0% | 14.4 / NA | 6 | P44S (CCA→TCA) | ybfN | predicted lipoprotein |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (1/5); total (1/5) |
AGAGGCATACAGCGCCTGTATCAACACCGCACAAGGTTCGCCAGAAAAAATTGAAGCCTGCCAGAGCGTGTTAAACGTGCTGAAGAAAGAG > W3110S.gb/710301‑710391 | agagGCATACAGCGCCTGTATCAACACCGCACAAGGTTCGTCAGAAAAAATTGAAGCCTGCCaga > 1:2299374/1‑65 (MQ=255) ccGCACAAGGTTCGTCAGAAAAAATTGAAGCCTGCCAGAGCGTGTTAAACGTGCTGAAGAAagag < 1:1709239/65‑1 (MQ=255) ccGCACAAGGTTCGTCAGAAAAAATTGAAGCCTGCCAGAGCGTGTTAAACGTGCTGAAGAAagag < 1:363392/65‑1 (MQ=255) ccGCACAAGGTTCGTCAGAAAAAATTGAAGCCTGCCAGAGCGTGTTAAACGTGCTGAAGAAagag < 1:742771/65‑1 (MQ=255) ccGCACAAGGTTCGTCAGAAAAAATTGAAGCCTGCCAGAGCGTGTTAAACGTGCTGAAGAAagag < 1:752836/65‑1 (MQ=255) ccGCACAAGGTTCGTCAGAAAAAATTGAAGCCTGCCAGAGCGTGTTAAACGTGCTGAAGAAagag < 1:821422/65‑1 (MQ=255) | AGAGGCATACAGCGCCTGTATCAACACCGCACAAGGTTCGCCAGAAAAAATTGAAGCCTGCCAGAGCGTGTTAAACGTGCTGAAGAAAGAG > W3110S.gb/710301‑710391 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |