Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 3,767,300 | A→G | I166V (ATA→GTA) | dgoA → | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 3,767,300 | 0 | A | G | 100.0% | 12.5 / NA | 5 | I166V (ATA→GTA) | dgoA | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (2/3); total (2/3) |
TCGGACATCGCAGTCTTTGCCGTTGGCGGCGTGACGCCAGAAAACCTGGCGCAGTGGATAGACGCAGGTTGTGCAGGGGCGGGCTTAGGCAGCGATCTCTATCGCGCCG > W3110S.gb/3767243‑3767351 | tCGGACATCGCAGTCTTTGCCGTTGGCGGCGTGACGCCAGAAAACCTGGCGCAGTGGGTAGACGc > 1:1186382/1‑65 (MQ=255) tCGGACATCGCAGTCTTTGCCGTTGGCGGCGTGACGCCAGAAAACCTGGCGCAGTGGGTAGACGc > 1:1569484/1‑65 (MQ=255) ccTGGCGCAGTGGGTAGACGCAGGTTGTGCAGGGGCGGGCTTAGGCAGCGATCTCTATCGCGCCg < 1:1324183/65‑1 (MQ=255) ccTGGCGCAGTGGGTAGACGCAGGTTGTGCAGGGGCGGGCTTAGGCAGCGATCTCTATCGCGCCg < 1:548131/65‑1 (MQ=255) ccTGGCGCAGTGGGGAGACGCAGGTTGTGCAGGGGCGGGCTTAGGCAGCGATCTCTATCGCGCCg < 1:1051377/65‑1 (MQ=255) | TCGGACATCGCAGTCTTTGCCGTTGGCGGCGTGACGCCAGAAAACCTGGCGCAGTGGATAGACGCAGGTTGTGCAGGGGCGGGCTTAGGCAGCGATCTCTATCGCGCCG > W3110S.gb/3767243‑3767351 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |