| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 1,806,448 | T→C | pseudogene (1641/1900 nt) pseudogene (1157/1416 nt) |
arpB → arpB → |
ECK1718:JW5278+JW1710:b4494; hypothetical protein ECK1718:JW1710:b1721; hypothetical protein, C‑ter fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 1,806,448 | 0 | T | C | 100.0% | 81.2 / NA | 23 | pseudogene (1641/1900 nt) pseudogene (1157/1416 nt) | arpB arpB | ECK1718:JW5278+JW1710:b4494; hypothetical protein ECK1718:JW1710:b1721; hypothetical protein, C‑ter fragment |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (2/21); total (2/21) | |||||||||||
GAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATTATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCT > W3110S.gb/1806389‑1806491 | gAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:1246760/65‑1 (MQ=255)gAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:1273326/65‑1 (MQ=255)gAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:291328/65‑1 (MQ=255)gAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:2538407/65‑1 (MQ=255)gAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:1928038/65‑1 (MQ=255)gAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:2059725/65‑1 (MQ=255)gAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:1023408/65‑1 (MQ=255)gAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:2369333/65‑1 (MQ=255) aGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:1589408/64‑1 (MQ=255) aaaGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:2117679/61‑1 (MQ=255) cTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACa < 1:1273876/57‑1 (MQ=255) aTTTATTAAAAGGAGCTACAGCACAGTGAACCCCTGCATCATACATCGCCATGAGCAAGGGTaa > 1:1458439/1‑64 (MQ=255) aTTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTaa > 1:2215786/1‑64 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:2281878/63‑1 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:2365712/63‑1 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:2369168/63‑1 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:2224269/63‑1 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:2472208/63‑1 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:1912681/63‑1 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:1579430/63‑1 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:441964/63‑1 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:65259/63‑1 (MQ=255) gCACAGGGAACCCCTGCATCATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCt < 1:787773/63‑1 (MQ=255) | GAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATTATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCT > W3110S.gb/1806389‑1806491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |