| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 90 (1.680) | 15/126 | 0.2 | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/315638‑315707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA > W3110S.gb/576911‑576979 CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:671988/71‑1CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:627550/71‑1CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:540803/71‑1CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:3889615/71‑1CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:1270189/71‑1CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:133090/71‑1CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:3362827/71‑1CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:2428984/71‑1CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA < 1:2339602/71‑1 ACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTG > 1:1062177/1‑71 ACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTG > 1:659529/1‑71 ACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTG > 1:3489450/1‑71 ACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTG > 1:2865554/1‑71 ACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTG > 1:25678/1‑71 ACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTG > 1:1832401/1‑71 ACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTG > 1:1028514/1‑71 ACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGT > 1:3617623/1‑70 AATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGt > 1:498111/1‑69 AATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGG > 1:1555188/1‑70 AATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGG > 1:4010763/1‑70 TGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAAC > 1:2887409/1‑70 TGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAAC > 1:786049/1‑70 TGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAAC > 1:1398857/1‑70 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGAT < 1:401268/71‑1 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGAT < 1:2609403/71‑1 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGAT < 1:2673242/71‑1 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGAT < 1:2493499/71‑1 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGAT < 1:3366508/71‑1 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGAGGTAACGAT < 1:3082488/71‑1 CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGAT < 1:3359801/58‑1 GGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCT < 1:3124126/71‑1 GGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCT < 1:1943297/71‑1 GGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGC < 1:3437197/70‑1 GGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGCAAGGTGTCAGCT < 1:2219286/71‑1 TGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACAT < 1:222325/69‑1 TGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACAT < 1:3331202/69‑1 TGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACAT < 1:1983805/69‑1 TCCATATTACGTGGGTATGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCA < 1:2130487/71‑1 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGGAGGTGTCAGCTACATgc > 1:123318/1‑67 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATgc > 1:376554/1‑67 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATgc > 1:3000908/1‑67 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATgc > 1:2597417/1‑67 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCA < 1:2381297/71‑1 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCA < 1:376110/71‑1 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCA < 1:754853/71‑1 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:3594439/1‑66 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:59020/1‑66 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:3943458/1‑66 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:1156419/1‑66 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:2872546/1‑66 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:2527658/1‑66 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:2204468/1‑66 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACA > 1:2471719/1‑66 TCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGT > 1:984382/1‑38 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAG < 1:2882283/50‑1 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAG < 1:2539819/50‑1 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAG < 1:2535402/50‑1 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAG < 1:3393494/50‑1 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAG < 1:2938874/50‑1 TATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAG < 1:2468938/50‑1 ATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAG < 1:1477113/49‑1 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA > 1:148309/1‑69 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA > 1:624458/1‑69 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA > 1:3941192/1‑69 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA > 1:2298811/1‑69 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA > 1:1083918/1‑69 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA > 1:3421610/1‑69 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACA > 1:251577/1‑69 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGC > 1:1432483/1‑56 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGT > 1:3360796/1‑50 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGT > 1:204994/1‑50 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGT > 1:4038218/1‑50 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGT > 1:4073400/1‑50 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGG > 1:3822607/1‑49 TTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAG > 1:1539807/1‑48 GTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATA > 1:1862959/1‑71 GTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATA > 1:842169/1‑71 GTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGA > 1:1111086/1‑69 TAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGCTATTGTT > 1:2069041/1‑71 GGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA < 1:668121/36‑1 GGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA < 1:1771390/36‑1 GGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA < 1:3992246/36‑1 GGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA < 1:3742560/36‑1 GGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA < 1:3209139/36‑1 GGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAA < 1:1702659/36‑1 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA < 1:1292236/70‑1 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA < 1:3083701/70‑1 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA < 1:2147867/70‑1 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA < 1:1979443/70‑1 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA < 1:1799504/70‑1 CCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/315638‑315707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTA > W3110S.gb/576911‑576979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |