| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 711,918 | +A | intergenic (‑31/+109) | fldA ← / ← ybfE | flavodoxin 1/LexA regulated protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 711,915 | 1 | . | A | 100.0% | 15.4 / NA | 6 | intergenic (‑28/+112) | fldA/ybfE | flavodoxin 1/LexA regulated protein |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (0/6); total (0/6) | |||||||||||
CTCTTGAAACTTATTG‑AAATGGGGGTGGAAAATTGCCCACGGATAAAGGCAATCATAGCAGAA > W3110S.gb/711900‑711962 | ctctTGAAACTTATTGAAAATGGGGGTGGAAAATTGCCCACGGATAAAGGCAATCATAGCAGaa < 1:1398952/64‑1 (MQ=255)ctctTGAAACTTATTGAAAATGGGGGTGGAAAATTGCCCACGGATAAAGGCAATCATAGCAGaa < 1:1431072/64‑1 (MQ=255)ctctTGAAACTTATTGAAAATGGGGGTGGAAAATTGCCCACGGATAAAGGCAATCATAGCAGaa < 1:1433836/64‑1 (MQ=255)ctctTGAAACTTATTGAAAATGGGGGTGGAAAATTGCCCACGGATAAAGGCAATCATAGCAGaa < 1:318091/64‑1 (MQ=255)ctctTGAAACTTATTGAAAATGGGGGTGGAAAATTGCCCACGGATAAAGGCAATCATAGCAGaa < 1:454589/64‑1 (MQ=255)ctctTGAAACTTATTGAAAATGGGGGTGGAAAATTGCCCACGGATAAAGGCAATCATAGCAGaa < 1:48617/64‑1 (MQ=255) | CTCTTGAAACTTATTG‑AAATGGGGGTGGAAAATTGCCCACGGATAAAGGCAATCATAGCAGAA > W3110S.gb/711900‑711962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |