Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2645493	2645699	207	63 [0]	[0] 4	pbpC	fused transglycosylase and transpeptidase

GGCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAGC  >  W3110S.gb/2645428‑2645492                                                                 | ggagATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1676986/4‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCTCCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:450867/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCCCCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:401934/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:544934/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:244449/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:248644/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:281235/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:291495/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:314274/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:327844/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:351604/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:378965/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:450060/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:472626/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:47491/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:504809/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1844647/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:62445/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:635852/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:643348/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:720465/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:735125/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:738716/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:790290/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:805458/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:830545/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:84715/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:866336/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:8816/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:888278/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:891824/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:984650/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1521341/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1036129/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1044740/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1065850/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1132201/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1182055/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1216000/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1222070/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1266864/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1325035/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1399522/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1450851/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1451218/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1496345/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1497157/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1515653/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:215320/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:154078/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1545979/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1569656/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1617674/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1630830/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1636664/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1647297/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1650979/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1666278/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1707454/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1772319/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1773664/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1773891/1‑65 (MQ=255) ggCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAgc  >  1:1024292/1‑65 (MQ=255)                                                                 | GGCGATTTTCCGAGATAAGCCCAACTTGCCGCACCGATCCCCTGCAACGTACCGCCAAACGGAGC  >  W3110S.gb/2645428‑2645492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑