Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2705563	2705616	54	53 [0]	[0] 4	lepA	GTP binding membrane protein

AGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTA  >  W3110S.gb/2705498‑2705562                                                                 | aGGCAGCCAGCGAACTGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:895197/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:405689/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:175236/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1760566/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1807911/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1808187/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:182120/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1821886/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1836676/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1862257/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:225205/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:234612/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:248687/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:35534/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1672822/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:409910/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:467644/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:489020/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:49651/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:524473/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:553232/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:674675/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:69431/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:792315/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:907526/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:970979/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1329213/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1012782/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1065441/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1140711/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1142911/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1143228/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1190868/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1245380/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1249077/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1255639/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1301252/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1311990/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1008633/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1333912/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1372140/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1378842/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1430957/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1462279/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1498459/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1508440/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1515575/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:157674/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1591768/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:1609419/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:163740/65‑1 (MQ=255) aGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGGGGCCCGGGGTGTCGATAAAGTTa  <  1:1078570/65‑1 (MQ=255)   gCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTa  <  1:501476/63‑1 (MQ=255)                                                                 | AGGCAGCCAGCGAACGGGAAACTTCATAGGAGAAGTCTACGTGGCCCGGGGTGTCGATAAAGTTA  >  W3110S.gb/2705498‑2705562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑