Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2708778	2708949	172	34 [0]	[0] 25	rpoE/nadB	RNA polymerase, sigma 24 (sigma E) factor/quinolinate synthase, L‑aspartate oxidase (B protein) subunit

CGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTC  >  W3110S.gb/2708714‑2708777                                                                | cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:666617/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1083070/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:298427/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:33077/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:37489/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:428709/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:490223/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:551717/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:622093/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:283272/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:667870/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:672978/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:774562/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:823405/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:900925/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:959091/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:966298/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1703819/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1154178/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1219568/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1312475/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:138316/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1421668/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1492079/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1631304/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1678770/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:245158/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1724776/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1758807/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1759777/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:178506/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:1836340/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:206680/1‑64 (MQ=255) cGCCACTCCATTAGCTGCAATTTGAGAAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTc  >  1:587941/1‑64 (MQ=255)                                                                | CGCCACTCCATTAGCTGCAATTTGAGCAAGCAAAGGGTTAGAGTGTCTCGTTTTTGTAAAGTTC  >  W3110S.gb/2708714‑2708777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑