Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2889046	2889320	275	53 [0]	[0] 108	cysJ	sulfite reductase, alpha subunit, flavoprotein

TTTTCTTTTTGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAGCG  >  W3110S.gb/2888981‑2889045                                                                 | ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:618638/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1070483/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1813444/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:187234/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:194560/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:202039/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:22996/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:326763/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:349835/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:39248/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:463562/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:486758/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:615206/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1778197/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:634826/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:641718/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:645145/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:698176/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:7715/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:798251/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:869964/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:874667/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:902995/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:962034/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:971357/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1356350/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1071706/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:110157/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1106845/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:111233/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1129498/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1160194/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1172505/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1208955/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1230835/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1259348/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1341855/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1353828/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1771409/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1376120/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1383536/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1424916/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1454847/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1458511/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1498675/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:15405/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1544815/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1631741/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1643549/65‑1 (MQ=255) ttttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1652376/65‑1 (MQ=255) ttttcattttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:562309/65‑1 (MQ=255)  tttctttttGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:1880632/64‑1 (MQ=255)                       aGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAgcg  <  1:949428/43‑1 (MQ=255)                                                                 | TTTTCTTTTTGATCGCGCGACCAGGCAAGATCGATACGTGTCAGCACGCCATCTTTGACGTAGCG  >  W3110S.gb/2888981‑2889045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑