Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	254140	254333	194	57 [0]	[0] 22	[prfH]–[pepD]	[prfH],[pepD]

GGAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAT  >  W3110S.gb/254075‑254139                                                                 | ggAAGCTGGAGCGACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1207019/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:534261/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1789626/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1802805/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1807273/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1819272/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1860375/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:202373/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:247042/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:300950/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:384861/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:395189/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:445533/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:476560/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:47812/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:516701/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1111427/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:598517/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:614784/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:649705/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:666951/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:713070/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:719978/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:778041/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:825506/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:836202/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:869706/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:941181/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:955881/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:148973/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1083277/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1126367/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1164865/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1168897/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1183749/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1186654/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:119153/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1200825/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1225226/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1264039/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1306566/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1504616/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1514174/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1563176/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1600426/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1616215/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1636977/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1639877/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1675362/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1695411/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1704143/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1714733/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1715948/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:1746666/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGCTCCAt  >  1:1789603/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGATGAAATCGCAGCGGCGAATGTTCCAt  >  1:1392017/1‑65 (MQ=255) ggAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGCCGCTGAAATCGCAGCGGCGAATGTTCCAt  >  1:898862/1‑65 (MQ=255)                                                                 | GGAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCAT  >  W3110S.gb/254075‑254139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑