Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2976982	2976985	4	57 [0]	[0] 44	lysA	diaminopimelate decarboxylase, PLP‑binding

ATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAA  >  W3110S.gb/2976918‑2976981                                                                | aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGGATAATCAACGCCAGAACCaa  <  1:830787/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACGaa  <  1:3654/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:527711/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1883027/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:190731/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:234248/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:288615/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:297414/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:300790/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:307367/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:331237/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:399600/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:435317/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:499840/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:510347/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1881106/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:551922/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:5820/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:650301/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:67772/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:682916/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:696224/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:703043/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:733908/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:750798/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:800527/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:812426/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:972197/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1428478/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1070028/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1109004/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1141683/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1157171/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1204317/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1233577/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1315356/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1330188/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1358995/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1386580/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1389673/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1421772/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1049713/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1585358/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1599224/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1612157/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1630784/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1674686/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1718864/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1721775/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1727999/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1729408/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1762149/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1826673/64‑1 (MQ=255) aTGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:185319/64‑1 (MQ=255)  tGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1273990/63‑1 (MQ=255)  tGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:1138060/63‑1 (MQ=255)                       cacacaCCTGTTCCAGATGGGCATAATCAACGCCAGAACCaa  <  1:278256/42‑1 (MQ=255)                                                                | ATGACCTGACGCACCATAGCACCACACACCTGTTCCAGATGGGCATAATCAACGCCAGAACCAA  >  W3110S.gb/2976918‑2976981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑