Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3005856	3005885	30	37 [0]	[0] 82	ygeW	conserved hypothetical protein

GGCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAC  >  W3110S.gb/3005791‑3005855                                                                 | ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1193334/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:768138/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:671488/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:649035/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:636329/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:511418/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:509853/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:494980/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:404494/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:360516/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:339086/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:311534/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:30931/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1861426/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1838723/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1799327/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1786732/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1705576/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1698046/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1668839/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1633624/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1099909/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1613737/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1215107/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:148668/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1792390/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1311527/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1278191/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1273062/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:122605/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:1221060/65‑1 (MQ=255) ggCTTAAAAGCACTGGAAAAACAGAGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:410167/65‑1 (MQ=255)  gCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:364156/64‑1 (MQ=255)  gCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:6850/64‑1 (MQ=255)  gCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:767823/64‑1 (MQ=255)  gCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAc  <  1:779504/64‑1 (MQ=255)                               gCACAGAACGCGCAACTCAAAGACTGGCATTGTAc  <  1:1623625/35‑1 (MQ=255)                                                                 | GGCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTAC  >  W3110S.gb/3005791‑3005855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑