Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3014196	3014383	188	50 [0]	[1] 2	ygfJ	conserved hypothetical protein

CACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAA  >  W3110S.gb/3014130‑3014195                                                                  | cACCATCGATA‑TTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:397199/65‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:47798/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1640526/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1844701/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1020224/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:244201/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:303246/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:33825/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:366327/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:417051/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:43357/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:448986/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:188747/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:483266/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:49982/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:674167/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:67573/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:681362/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:767294/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:804268/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:829096/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:907396/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:992920/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1377895/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1026620/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1059799/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1117396/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1127207/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1138333/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1240968/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1289373/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1373851/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:163705/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1396049/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1399714/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1431903/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1432548/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1480943/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:149347/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1501318/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1509972/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1561958/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1585662/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1617101/63‑1 (MQ=255)    cATCGATATTTTTAGAAAAATCTGGGCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:502896/63‑1 (MQ=255)    cATCGATATATTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:787773/63‑1 (MQ=255)      tCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:653190/61‑1 (MQ=255)       cGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:198945/60‑1 (MQ=255)         atatTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:1287185/58‑1 (MQ=255)                    aaaaTCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATaa  <  1:856616/47‑1 (MQ=255)                                                                  | CACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAA  >  W3110S.gb/3014130‑3014195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑