Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3114086	3114233	148	38 [0]	[0] 137	yghJ	predicted inner membrane lipoprotein

CGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTA  >  W3110S.gb/3114026‑3114085                                                            | cgatGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:241918/4‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGATGTCGTTCATCGAGCTGGCAAAGGTa  >  1:574428/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:307628/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:266226/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:327065/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:387276/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:391902/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:526950/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:531143/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:533308/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:549425/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:60279/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:625136/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:633147/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:703875/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:719662/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:758984/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:861563/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:931243/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:950562/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1540640/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1055457/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1077860/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1092630/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1167070/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1217314/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1327254/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1335885/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1410311/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1021473/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1558155/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1594454/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1637899/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1648138/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1697695/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1744254/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:1787658/1‑60 (MQ=255) cGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTa  >  1:261893/1‑60 (MQ=255)                                                            | CGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTA  >  W3110S.gb/3114026‑3114085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑