Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3163414	3163668	255	59 [0]	[0] 34	parC	DNA topoisomerase IV, subunit A

TTTGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAACC  >  W3110S.gb/3163349‑3163413                                                                 | tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAGGGCCAAAcc  >  1:1201177/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:709234/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:309563/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:390955/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:452831/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:473516/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:47659/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:477632/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:549965/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:564175/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:588861/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:613916/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:61622/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:655515/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:684981/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:696496/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:232342/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:748314/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:750227/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:814148/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:819255/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:877074/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:891612/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:923511/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:925837/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:95131/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:959099/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:962660/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:982289/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:983230/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:158816/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1063003/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:106722/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1135679/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1151248/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1178339/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1207968/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1238455/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1275700/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:130773/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1413328/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1417148/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1429635/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1435929/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1444688/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1597575/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:160975/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1640968/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1651888/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1671087/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1677174/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:171204/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1765864/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1769392/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1856436/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1877202/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:208014/1‑65 (MQ=255) tttGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:1019205/1‑65 (MQ=255) ttaggCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAAcc  >  1:239805/4‑65 (MQ=255)                                                                 | TTTGGCAAGATGACGCAGTTTCAGTTCGAGGATCGCTTCCGCCTGGGTTTCCGTAAGGCCAAACC  >  W3110S.gb/3163349‑3163413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑