Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	298189	298522	334	39 [0]	[0] 33	yagR	predicted oxidoreductase with molybdenum‑binding domain

CGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATACCCC  >  W3110S.gb/298124‑298188                                                                 | cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:433853/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1717689/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1741343/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1752428/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:252708/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:267855/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:274757/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:300531/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:330215/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:332460/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1687934/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:441451/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:444990/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:487059/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:498907/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:544868/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:643924/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:720143/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:726463/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:806041/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1282181/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1063880/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1079765/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1084785/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1097191/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1104587/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1159842/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1177641/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1249408/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:128115/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1030073/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1289433/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1308214/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:133720/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:137688/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1505509/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1530771/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1591507/1‑65 (MQ=255) cGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATAcccc  >  1:1658634/1‑65 (MQ=255)                                                                 | CGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCGGCACCTCATACCCC  >  W3110S.gb/298124‑298188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑