Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3346688	3346718	31	34 [0]	[0] 71	ptsN	sugar‑specific enzyme IIA component of PTS

GTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGC  >  W3110S.gb/3346623‑3346687                                                                 | gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGTAGAAGATACTCTGCGCGCCGTTGGc  >  1:1172978/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCTGTTGGc  >  1:1587692/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:736968/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:428977/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:436452/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:507543/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:537635/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:575725/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:690299/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:731573/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:39090/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:748627/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:824947/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:838119/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:894310/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:900601/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:928223/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:978237/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:402520/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:1035599/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:370525/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:267351/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:182870/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:171799/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:1551550/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:1482365/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:143884/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:134895/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:1332751/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:1259174/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:1253118/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:1094489/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:1082730/1‑65 (MQ=255) gTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGc  >  1:1044413/1‑65 (MQ=255)                                                                 | GTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGC  >  W3110S.gb/3346623‑3346687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑