Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3360108	3360424	317	46 [0]	[0] 32	gltD	glutamate synthase, 4Fe‑4S protein, small subunit

GAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGA  >  W3110S.gb/3360048‑3360107                                                            | gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:61967/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:187805/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:192475/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:261103/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:281271/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:333435/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:414220/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:421486/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:471631/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:484756/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:489687/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:57027/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1828433/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:644358/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:648015/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:674313/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:731040/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:771393/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:79065/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:799386/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:810363/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:955541/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:990531/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1469099/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1026778/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1129538/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:115454/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1203259/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:12158/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1277032/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1340921/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1354528/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1358289/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1402165/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1403295/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1020519/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1479544/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:150347/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1511473/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:154273/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1559903/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1620313/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1680580/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1777641/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1811356/60‑1 (MQ=255) gAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGa  <  1:1827614/60‑1 (MQ=255)                                                            | GAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGA  >  W3110S.gb/3360048‑3360107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑