Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3382619	3382632	14	72 [0]	[0] 128	degS	serine endoprotease, periplasmic

CCATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAC  >  W3110S.gb/3382554‑3382618                                                                 | ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:473408/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:570301/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:547568/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:544397/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:526012/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:493792/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:485224/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:483070/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:477881/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:572050/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:468808/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:429444/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:425432/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:374507/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:358028/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:349321/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:31544/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:297713/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:838937/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:98656/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:977990/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:949662/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:937366/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:912663/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:902005/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:890810/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:839102/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:288181/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:803872/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:796797/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:693325/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:689642/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:652012/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:621603/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:609070/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:604679/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1234503/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1046584/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1367712/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1356692/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1338155/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1308446/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1302102/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1297275/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:128002/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1386107/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1227679/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1186545/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1159439/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1137977/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1126052/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:111809/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1114039/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1046998/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1713869/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:285604/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1880360/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1796433/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1787988/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1787538/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1733879/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1725234/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1431204/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1708356/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1674759/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1660052/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1642376/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1606260/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1534835/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1487965/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAc  >  1:1440949/1‑65 (MQ=255) ccATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGACTGAACCCGACCGGGCGGCAAAAc  >  1:1179035/1‑65 (MQ=255)                                                                 | CCATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAAC  >  W3110S.gb/3382554‑3382618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑