Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3432607	3432616	10	93 [0]	[0] 115	zraR	fused DNA‑binding response regulator in two‑component regulatory system with ZraS

CAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGA  >  W3110S.gb/3432542‑3432606                                                                 | cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGTTCCTGAATCGCACGCAGCAGa  <  1:598213/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTTAATCGCACGCAGCAGa  <  1:1415277/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:346071/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:43290/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:411514/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:404176/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:388880/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:387686/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:370709/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:366773/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:48185/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:333615/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:319938/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:281146/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:268959/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:211894/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1879940/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1873766/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1871017/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1869078/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:808625/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:99136/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:983299/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:964877/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:948900/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:931861/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:877307/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:861527/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:819949/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1043701/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:749448/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:643657/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:614044/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:606787/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:604049/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:552268/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:506033/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:489353/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1271502/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1337959/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1335669/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1333195/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1319688/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1316753/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1293932/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1276448/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1272715/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1847489/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1259561/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1227762/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1223496/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:121192/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1190299/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1169788/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1116025/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1362512/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1367671/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1854508/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1396953/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1606395/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1428656/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1501976/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1829775/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1594902/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1745294/65‑1 (MQ=255) cAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:182968/65‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:756684/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:712043/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:801143/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1213541/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1205102/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:881548/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:885981/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:943709/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1124573/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1096913/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1024880/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:732426/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:397862/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:294936/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1559078/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1279363/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:52129/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1415693/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:469048/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:418118/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:413162/64‑1 (MQ=255)  aaCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:398509/64‑1 (MQ=255)   aCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:828061/63‑1 (MQ=255)   aCCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:514536/63‑1 (MQ=255)         aTAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:740267/57‑1 (MQ=255)          tAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:1606470/56‑1 (MQ=255)                            cacGCTGATCTTCGCGCTCCTGAATCGCACGCAGCAGa  <  1:326020/38‑1 (MQ=255)                                                                 | CAACCGAGATAATCTGGTTGCTACCGACACGCTGAACTTCGCGCTCCTGAATCGCACGCAGCAGA  >  W3110S.gb/3432542‑3432606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑