Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3504754	3504971	218	40 [0]	[0] 12	metL	fused aspartokinase II and homoserine dehydrogenase II

CGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCACC  >  W3110S.gb/3504689‑3504753                                                                 | cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:600605/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1835314/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:233506/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:267767/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:280268/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:365004/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:399786/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:412990/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:416050/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:442489/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1820157/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:614212/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:626096/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:632181/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:649239/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:694167/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:780208/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:848904/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:901554/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:990377/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1404136/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1131117/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1140704/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1143562/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1208589/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1212367/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1240480/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1262770/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1303977/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1346598/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1066983/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1495532/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1504914/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1514110/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1516692/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1586946/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:164753/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1668198/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1770053/1‑65 (MQ=255) cGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCAcc  >  1:1809354/1‑65 (MQ=255)                                                                 | CGTTCAGTTCATCGCCATTTTCAAAGAAATGGTCGATGCTGCCGCCTTCGCAATGAGCAGGCACC  >  W3110S.gb/3504689‑3504753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑