Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3549052	3549260	209	15 [0]	[0] 60	yiiG	conserved hypothetical protein

CCCTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATCG  >  W3110S.gb/3548987‑3549051                                                                 | cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:1024898/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:1058898/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:1070105/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:1195786/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:1384427/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:1458185/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:1524641/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:1719058/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:1880102/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:24275/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:346159/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:455078/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:576571/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:66112/1‑65 (MQ=255) cccTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATcg  >  1:819721/1‑65 (MQ=255)                                                                 | CCCTTCTCTTTCTTCAATATTTTTCAGTTCCGCAAGCTGACGCTTATCATTAATTTCCTGAATCG  >  W3110S.gb/3548987‑3549051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑