Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3553781	3554052	272	62 [0]	[0] 61	[fdoG]–[fdoH]	[fdoG],[fdoH]

TGGTGACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCG  >  W3110S.gb/3553716‑3553780                                                                 | tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:208700/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1508227/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1509864/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:105350/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1640817/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1651870/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1702850/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1745068/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1762794/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1819728/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1841539/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1846483/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1848317/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1587445/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:25501/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:271668/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:346780/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:389606/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:403688/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:478544/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:517941/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:637885/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:740775/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:750696/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:799254/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:960674/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1440518/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1263079/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1225322/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1319251/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1351994/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1389674/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1219575/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1219195/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1399818/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1438463/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:143963/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1449320/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1215761/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1450048/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1198488/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1485236/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1487354/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1487445/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1192053/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1114441/65‑1 (MQ=255) tggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:107968/65‑1 (MQ=255) tcgtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1511310/63‑1 (MQ=255)  ggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:188024/64‑1 (MQ=255)  ggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:575513/64‑1 (MQ=255)  ggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:459000/64‑1 (MQ=255)  ggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1506225/64‑1 (MQ=255)  ggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:13952/64‑1 (MQ=255)  ggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1828171/64‑1 (MQ=255)  ggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1710862/64‑1 (MQ=255)  ggtgACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1686866/64‑1 (MQ=255)  ggtgAACAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:299315/64‑1 (MQ=255)   gtgACCATACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1498785/63‑1 (MQ=255)        cAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1584229/58‑1 (MQ=255)                     aCGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1575681/45‑1 (MQ=255)                            aaGCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:1303825/38‑1 (MQ=255)                              gCGAACGGCAAAGATATCGATACCATCGGTATTCCg  <  1:427901/36‑1 (MQ=255)                                                                 | TGGTGACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCG  >  W3110S.gb/3553716‑3553780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑