Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3581452	3581592	141	29 [0]	[0] 3	glnG	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)

AATAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTT  >  W3110S.gb/3581387‑3581451                                                                 | aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:292512/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:988074/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:986392/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:869152/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:813883/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:611196/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:600689/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:591402/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:546572/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:453598/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:446594/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:44053/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:355396/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:331871/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:29755/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:1013600/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:187474/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:1816990/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:178922/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:1687124/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:1681994/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:16741/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:1595595/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:155779/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:154507/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:1401511/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:1371246/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:1367177/1‑65 (MQ=255) aaTAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGtt  >  1:1329806/1‑65 (MQ=255)                                                                 | AATAAAGGTGACGTTTATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTT  >  W3110S.gb/3581387‑3581451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑