Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3697463	3698174	712	30 [0]	[0] 102	[hsrA]–[rbsR]	[hsrA],[rbsR]

CAGCAGCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTAAA  >  W3110S.gb/3697398‑3697462                                                                 | cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAGGACAGCGTaaa  >  1:972935/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:332768/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:988524/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:943926/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:928194/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:892045/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:882874/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:843493/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:786191/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:767191/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:663388/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:449988/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:360362/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:352799/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:347610/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1294003/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:251050/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:224145/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:20997/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1855401/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1799846/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1738244/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1651092/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1537357/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1520759/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1514926/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1435376/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1422940/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1307346/1‑65 (MQ=255) cagcagCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTaaa  >  1:1297465/1‑65 (MQ=255)                                                                 | CAGCAGCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTAAA  >  W3110S.gb/3697398‑3697462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑