Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3745892	3746007	116	47 [0]	[0] 26	mdtL	multidrug efflux system protein

GGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAT  >  W3110S.gb/3745830‑3745891                                                              | ggTTTATCCGAAGCTGCGGTGGCCTCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:552256/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACTACAt  <  1:1794445/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:60542/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1836093/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:226973/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:346258/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:37478/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:395993/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:405503/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:570860/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:577960/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:593645/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1833920/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:630362/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:736304/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:739690/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:743794/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:815751/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:833832/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:925209/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:931581/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:958553/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:962177/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1444322/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1030921/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1041448/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1081182/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1082017/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1125885/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1254564/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1266931/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1323765/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1334697/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1395103/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1029936/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1487340/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1512045/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1514555/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1541177/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1582413/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1594339/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1672923/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:168746/62‑1 (MQ=255) ggTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:1802066/62‑1 (MQ=255)  gTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:721629/61‑1 (MQ=255)  gTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAt  <  1:31858/61‑1 (MQ=255)                     ggCCGCTGGGCGCGTTTCCTTTAAAATAAACAAAGACAACAt  <  1:1557391/42‑1 (MQ=255)                                                              | GGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGACAACAT  >  W3110S.gb/3745830‑3745891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑