Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	340894	341061	168	59 [0]	[0] 5	yahJ	predicted deaminase with metallo‑dependent hydrolase domain

TACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCG  >  W3110S.gb/340829‑340893                                                                 | tACACTCAGGAGCTGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1747900/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGTACCACCATTGCCCg  <  1:997643/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:548101/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1035081/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:219015/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:274482/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:366970/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:3687/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:377343/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:385311/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:403162/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:447532/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:453742/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:477943/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:533915/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:547286/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1849061/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:630757/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:635730/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:649946/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:781872/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:805316/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:812979/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:864838/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:889568/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:961262/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:980585/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:995380/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:998356/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:152942/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1044113/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1090345/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:112685/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1146211/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1168368/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1201108/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1238365/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1257389/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1277559/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1346256/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1371440/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1424556/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1833385/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1548003/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1592279/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1593784/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1606458/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1615365/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:166328/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1694351/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:176712/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1769900/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1801325/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1821689/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGAACCACCATTGCCCg  <  1:1556124/65‑1 (MQ=255) tACACTCAGGAGCGGGCAGAAAAACTGATAGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:469122/65‑1 (MQ=255) tACACTCAGGAGCAGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1046309/65‑1 (MQ=255) tACACTCAGCAGCGGGCAGAAAAACTGATTGATTTAATGCAGTCGAAAGGCACCACCATTGCCCg  <  1:1878920/65‑1 (MQ=255)  acacTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCg  <  1:918316/64‑1 (MQ=255)                                                                 | TACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCG  >  W3110S.gb/340829‑340893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑