Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3994955	3995135	181	41 [0]	[0] 157	[yhiR]	[yhiR]

AACGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTC  >  W3110S.gb/3994891‑3994954                                                                | aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAAGGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1635985/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:417842/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1747235/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1819192/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1829163/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:184722/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:291641/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:334664/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:340551/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:370176/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1729367/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:420890/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:457848/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:592528/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:601516/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:695955/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:768241/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:886120/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:927837/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:944098/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1454996/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1135896/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1166121/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1208084/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1222867/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:124187/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1324970/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1353440/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1451243/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1130708/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1510052/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1523588/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1633304/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1649239/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1694696/64‑1 (MQ=255) aaCGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTCTCAGCGACTc  <  1:1757022/64‑1 (MQ=255)   cGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1476715/62‑1 (MQ=255)       cGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:557562/58‑1 (MQ=255)          ccccTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1492479/55‑1 (MQ=255)            ccTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:1624563/53‑1 (MQ=255)                          gagaTAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTc  <  1:117694/39‑1 (MQ=255)                                                                | AACGCCCGGCCCCTGCGTGGGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTC  >  W3110S.gb/3994891‑3994954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑