Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4041581	4041586	6	80 [0]	[0] 53	livJ	leucine/isoleucine/valine transporter subunit

GTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAC  >  W3110S.gb/4041518‑4041580                                                               | gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAATGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1688622/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGTTGGTGACCAAGCCGAAGAAc  <  1:513922/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:351286/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:504385/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:471254/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:468304/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:462322/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:439905/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:378086/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:377351/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:364193/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:574055/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:315181/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:295090/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:21479/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1879890/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1825063/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1789342/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1777479/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1061414/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:808941/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:995392/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:978728/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:968900/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:950254/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:939179/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:929189/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:916457/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:906420/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:86730/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1746716/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:764510/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:764110/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:753897/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:705926/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:704447/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:68033/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:595934/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:593125/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1310178/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1719665/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1404650/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1400336/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1399070/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1358592/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1348329/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1341109/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1329278/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1310286/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1430412/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1306770/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1248686/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1228278/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1184498/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1150783/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1141030/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1122155/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1071414/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1063041/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1621685/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1715465/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1705315/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1696284/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1674451/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1667850/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1656157/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1637334/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1628087/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1436994/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1587375/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1540234/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1522992/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1520058/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1512199/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1506842/63‑1 (MQ=255) gTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1438359/63‑1 (MQ=255)  tttCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:1644972/62‑1 (MQ=255)  tttCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:640838/62‑1 (MQ=255)              aCATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:933150/50‑1 (MQ=255)                          aaTCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAc  <  1:437883/38‑1 (MQ=255)                                                               | GTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAAC  >  W3110S.gb/4041518‑4041580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑