Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4104587	4104721	135	46 [0]	[0] 2	envZ	sensory histidine kinase in two‑component regulatory system with OmpR

ACGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTG  >  W3110S.gb/4104522‑4104586                                                                 | aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:649499/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1014062/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:19590/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:213920/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:249662/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:29296/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:324892/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:358311/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:364854/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:387615/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:397088/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:577584/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1793791/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:649658/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:657528/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:665666/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:67802/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:760800/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:765288/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:778604/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:80163/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:843283/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:854498/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1357486/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1044472/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1050193/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1068434/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1070050/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1115981/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1121275/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1192377/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1221648/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1268641/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1290514/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1698038/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:138152/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1419997/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1428210/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1458855/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1465544/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1529984/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1532671/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1553530/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:1562866/65‑1 (MQ=255) aCGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:167285/65‑1 (MQ=255)    tCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTg  <  1:770394/62‑1 (MQ=255)                                                                 | ACGTCTTTGTACCGGACGGCTCTAAAGCATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTG  >  W3110S.gb/4104522‑4104586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑