Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4182444	4182795	352	58 [0]	[0] 59	gspD	general secretory pathway component, cryptic

CTTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCG  >  W3110S.gb/4182379‑4182443                                                                 | ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:643590/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:290764/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:290774/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:292525/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:319405/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:337325/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:354429/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:390507/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:441898/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:449399/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:502846/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:537773/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:587508/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:620120/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:642949/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:280016/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:667749/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:670375/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:712511/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:722724/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:736747/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:742565/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:756278/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:76177/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:786756/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:79667/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:966013/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:97554/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:987902/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1413627/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1082367/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1099397/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1139452/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1151151/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1162055/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1170343/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1207967/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1218124/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1236143/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1253942/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1265035/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:12772/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1303041/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1303313/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1003394/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1447370/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1459590/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1464057/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1506534/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1614541/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1663252/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1673368/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1707231/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1708430/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:1859235/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:187920/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:19056/1‑65 (MQ=255) ctTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCg  >  1:244562/1‑65 (MQ=255)                                                                 | CTTTAGAAAAATCATCCAGCAATCCGCCCAGGACCACCGTTTCACCGGTTTTGACCAGCACGGCG  >  W3110S.gb/4182379‑4182443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑