Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4183866	4183906	41	31 [0]	[0] 51	gspD	general secretory pathway component, cryptic

TAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTCCC  >  W3110S.gb/4183802‑4183865                                                                | tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGATATGGTTccc  >  1:290563/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:333675/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:994921/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:99464/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:981272/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:948203/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:922556/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:87109/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:852225/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:693468/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:675521/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:656829/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:606668/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:579667/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:499204/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:486873/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:416255/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:1022523/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:322783/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:296171/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:291587/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:28795/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:248792/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:1843880/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:1826874/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:1775306/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:1449428/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:1441553/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:1313877/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:1247882/1‑64 (MQ=255) tAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTccc  >  1:1160698/1‑64 (MQ=255)                                                                | TAAAAAGAACTGGTAGTACTCCTGTTGGCTAAACGTATCATTACTGCGTACGGAAATGGTTCCC  >  W3110S.gb/4183802‑4183865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑