Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4193440	4193508	69	90 [0]	[0] 4	rplE	50S ribosomal subunit protein L5

CATCTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGATA  >  W3110S.gb/4193387‑4193439                                                     | catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:426281/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:636685/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:631460/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:558790/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:529901/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:527984/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:470604/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:467884/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:455486/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:454342/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:42998/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:641772/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:41180/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:354079/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:353357/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:34877/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:31794/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:254776/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:248709/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1042731/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1881285/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1857632/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:887191/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:984069/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:983989/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:981218/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:980821/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:971066/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:945427/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:920153/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:915114/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:907660/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:894209/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:241048/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:882289/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:820017/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:75696/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:752511/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:723176/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:676754/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:676454/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:653947/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:646082/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1199637/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1413071/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1410751/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1384280/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1791051/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1365322/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1343478/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:125880/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1240605/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1210556/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1369544/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1188210/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1160154/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1150431/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1146500/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1125194/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1080064/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:106772/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1062040/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1050373/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1427176/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1784349/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1777574/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1766394/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1753661/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1714326/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1709551/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1640680/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1609968/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:159795/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1532069/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1414046/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1460508/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1465695/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1479715/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1593827/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1549484/53‑1 (MQ=255) catcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1582533/53‑1 (MQ=255) catcTTCCAAGAAATCGACTACGATAAAGTCGACCGCGTTCGTTGTTTGGata  <  1:1741624/53‑1 (MQ=255) catcTTACCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:777260/53‑1 (MQ=255)  atcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:720332/52‑1 (MQ=255)  atcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:69328/52‑1 (MQ=255)  atcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1064062/52‑1 (MQ=255)  atcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:7647/52‑1 (MQ=255)   tcTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:79681/51‑1 (MQ=255)      tCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:1095357/48‑1 (MQ=255)                  aCTACGATAAAGTCGACCGCGTTCGTGGTTTGGata  <  1:106238/36‑1 (MQ=255)                                                     | CATCTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGATA  >  W3110S.gb/4193387‑4193439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑